CDS

Accession Number TCMCG081C04752
gbkey CDS
Protein Id XP_002282614.1
Location complement(join(6217557..6217916,6218031..6218077,6218940..6219051,6221019..6221120,6221271..6221384,6222769..6222849,6222942..6222989,6223073..6223210,6223376..6223447,6226528..6226884))
Gene LOC100253686
GeneID 100253686
Organism Vitis vinifera

Protein

Length 476aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002282578.3
Definition PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA pseudouridine synthase 4
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGTAGCCGTTCTCCGCCGCCGATTTTTCCTCCAATCTCGACGGGAAACCACCGGGAAGGTTGGCGACATGTTCTGTATTTCAGCCCTGGATCAACAGCGGTCCTGCTTTGCCACCAGTAACGACGCCGTTTCCGAAGCGCACAAGAGCAAGAAGGGCAAATGGTTCACCTTGCCGGCGTTCACTCCCGTCGTCGACGCTTCGTCCTTGGGGAAAGTGCTTTCCGGACATCGTACGGACTTGAACACCGGTAATACCACCGCTGGAGCCTCTACGACGGCTTTGAAATGGGTGGTTCGGTGCTGTCCGCAACTGCCGAGGTCGCTCGTACAGAAGCTCTTTCGCTTGAGACAGGTTAGAAGAGAATCCTACAACATGATAACTTCTGATATTGGTGTTCAAAACCAAGAACATCGACTTAAAAGGGTGGCTGCCAAGGACTTGATGAACTTGGGAGATCAAATCCTTCTTCCTATCACAGTTGAAGAGTTTCCTTCGGAAAAACATGAGTACCATTGCAATGATGAAGAAATAAACTTTGTCCATAACCTTGAATTGTATAAGGATCCAGCCATTATTGTTGTCAATAAACCTCCGGGATTGCCTGTTCAGGGTGGCATTGGCATCAAAAGGAGTTTAGATGAACTGGCTGCAACTTATTTAAGATATGACTGCTCAGAACCCCCTCGACTAGTACACAGACTTGACAGAGATAGTAGTGGCATCTTGATCATGGGGAGGACACAAACAAGTGCTACAATTCTGCATTCCATATTTCGTGAGAAAACATTTGGAGCATCAAATAATGACATTGATACCAAGAAGAGAATTTTGCAAAGGAGGTATTGGGCACTTGTCATTGGTTCTCCAAGACGTCCAAGGGGATTAATTTCAGCACCATTAGGAAAGGTGGTGGTGGATGATGGAAAGTCTGAACGAATCACCATTGTTGACAATGTACAAACTATGTCATCTCAGCATGCAATTACAGAGTATCGGGTGATTAAATCTTCATGTCATGGTTACACATGGTTAGAGTTGTCTCCTCTCACTGGTAGAAAGCACCAGCTTCGAGTACACTGTGCTGAGGTATTGGGAACACCCATAGTTGGAGACTACAAATATGGATGGCAAGCTCATAGGAAGTGGAAGCAATTGTTTCAGTCTAATATTGAAAAGAACTTGGATGAAAATCTTTCCAATAGAAAGACACATCCTTTTGGCCTTGATTTGGAGAGTGGAAGTATCTTGGATAAACAGCCCCACCTGCATCTCCATTGTAAGCAAATGGTTTTGCCCAATGTTTCTCTGGCCTTGCAGAATTTGCAATTATCTGCAGAGTGTGATCTTTCAGAACTGGAAAGCCTCGAGTTTGTTGCTCCTTTGCCTTCACACATGCAAAGAAGTTGGGACATTTTGAATTCATGA
Protein:  
MAVAVLRRRFFLQSRRETTGKVGDMFCISALDQQRSCFATSNDAVSEAHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILNS